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5/19/2017 7:33:03 AM | Browse: 1105 | Download: 2230
Publication Name World Journal of Stem Cells
Manuscript ID 33302
Country Japan
Received
2017-02-07 10:57
Peer-Review Started
2017-02-07 13:49
To Make the First Decision
2017-03-06 18:16
Return for Revision
2017-03-07 16:02
Revised
2017-04-03 11:41
Second Decision
2017-04-24 17:54
Accepted by Journal Editor-in-Chief
2017-04-25 07:29
Accepted by Company Editor-in-Chief
2017-05-05 16:41
Articles in Press
2017-05-05 16:41
Publication Fee Transferred
Edit the Manuscript by Language Editor
Typeset the Manuscript
2017-05-15 06:06
Publish the Manuscript Online
2017-05-19 07:33
ISSN 1948-0210 (online)
Open Access This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/
Copyright © The Author(s) 2017. Published by Baishideng Publishing Group Inc. All rights reserved.
Article Reprints For details, please visit: http://www.wjgnet.com/bpg/gerinfo/247
Permissions For details, please visit: http://www.wjgnet.com/bpg/gerinfo/207
Publisher Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA
Website http://www.wjgnet.com
Category Cell Biology
Manuscript Type Basic Study
Article Title Next-generation sequencing traces human induced pluripotent stem cell lines clonally generated from heterogeneous cancer tissue
Manuscript Source Invited Manuscript
All Author List Tetsuya Ishikawa
Funding Agency and Grant Number
Funding Agency Grant Number
JSPS KAKENHI 16K07135
Corresponding Author Tetsuya Ishikawa, PhD (DMSc), Laboratory Head, Central Animal Division, Fundamental Inno­vative Oncology Core Center, National Cancer Center Research Institute, 1-1, Tsukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan. humanipscells@gmail.com
Key Words Colon cancer; Next-generation sequencing; Single-nucleotide variant; Genotype; Heterogeneous cancer tissue; Cancer associated fibroblast; Pre-cancer cells; Induced pluripotent stem cell; Single cell; Clonal evolution
Core Tip Ten induced pluripotent stem cell (iPSC) lines were clonally generated from heterogeneous colon cancer tissues and analyzed with next-generation sequencing. Non-synonymous single-nucleotide variants (SNVs) of the iPSC lines were not identical to the genotypes of the cancer tissues. The SNVs were de novo or pre-existing mutations that originated from a minor population within the cancer tissue. Meanwhile, the genotypes of the iPSC lines were not mutated genotypes of the cancer tissues, suggesting that the starting cells for the iPSC lines were not mature cancer cells. Thus, the genotypes of iPSC lines can be used to trace the genomic origins of single cells within heterogeneous cancer tissue.
Publish Date 2017-05-19 07:33
Citation Ishikawa T. Next-generation sequencing traces human induced pluripotent stem cell lines clonally generated from heterogeneous cancer tissue. World J Stem Cells 2017; 9(5): 77-88
URL URL: http://www.wjgnet.com/1948-0210/full/v9/i5/77.htm
DOI http://dx.doi.org/10.4252/wjsc.v9.i5.77
Full Article (PDF) WJSC-9-77.pdf
Full Article (Word) WJSC-9-77.doc
Manuscript File 33302-Review.docx
Answering Reviewers 33302-Answering reviewers.pdf
Audio Core Tip 33302-Audio core tip.MP3
Biostatistics Review Certificate 33302-Biostatistics statement.pdf
Conflict-of-Interest Disclosure Form 33302-Conflict-of-interest statement.pdf
Copyright License Agreement 33302-Copyright assignment.pdf
Approved Grant Application Form(s) or Funding Agency Copy of any Approval Document(s) 33302-Grant application form(s).pdf
Signed Informed Consent Form(s) or Document(s) Informed_Consent_Statement_20170131184911.docx
Institutional Animal Care and Use Committee Approval Form or Document 33302-Institutional animal care and use committee statement.pdf
Institutional Review Board Approval Form or Document 33302-Institutional review board statement.pdf
Supplementary Material 33302-Supplementary material.xlsx
Peer-review Report 33302-Peer-review(s).pdf
Journal Editor-in-Chief Review Report 33302-Journal editor-in-chief review report.pdf
Scientific Misconduct Check 33302-Scientific misconduct check.pdf
Scientific Editor Work List 33302-Scientific editor work list.pdf