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10/28/2020 8:26:09 AM | Browse: 786 | Download: 2074
Publication Name World Journal of Gastroenterology
Manuscript ID 57895
Country South Korea
Received
2020-06-28 07:33
Peer-Review Started
2020-06-28 07:34
To Make the First Decision
Return for Revision
2020-07-28 21:19
Revised
2020-08-09 04:55
Second Decision
2020-09-24 12:26
Accepted by Journal Editor-in-Chief
Accepted by Company Editor-in-Chief
2020-09-25 05:30
Articles in Press
2020-09-25 05:30
Publication Fee Transferred
Edit the Manuscript by Language Editor
Typeset the Manuscript
2020-10-20 10:00
Publish the Manuscript Online
2020-10-28 08:26
ISSN 1007-9327 (print) and 2219-2840 (online)
Open Access This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/Licenses/by-nc/4.0/
Copyright The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved.
Article Reprints For details, please visit: http://www.wjgnet.com/bpg/gerinfo/247
Permissions For details, please visit: http://www.wjgnet.com/bpg/gerinfo/207
Publisher Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA
Website http://www.wjgnet.com
Category Pathology
Manuscript Type Basic Study
Article Title Prediction of clinically actionable genetic alterations from colorectal cancer histopathology images using deep learning
Manuscript Source Invited Manuscript
All Author List Hyun-Jong Jang, Ahwon Lee, J Kang, In Hye Song and Sung Hak Lee
ORCID
Author(s) ORCID Number
Hyun-Jong Jang http://orcid.org/0000-0003-4535-1560
Ahwon Lee http://orcid.org/0000-0002-2523-9531
J Kang http://orcid.org/0000-0002-7967-0917
In Hye Song http://orcid.org/0000-0001-6325-3548
Sung Hak Lee http://orcid.org/0000-0003-1020-5838
Funding Agency and Grant Number
Funding Agency Grant Number
Research Fund of Seoul St. Mary’s Hospital made in the program year of 2018
Corresponding Author Sung Hak Lee, MD, PhD, Associate Professor, Department of Hospital Pathology, Seoul St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, 222, Banpo-daero, Seocho-gu, Seoul 06591, South Korea. hakjjang@catholic.ac.kr
Key Words Colorectal cancer; Mutation; Deep learning; Computational pathology; Computer-aided diagnosis; Digital pathology
Core Tip Identifying genetic mutations in cancer patients have been increasingly important because distinctive mutational patterns can be very informative to determine the optimal therapy. This study aimed to investigate the feasibility of mutation prediction for the frequently occurring actionable mutations with colorectal cancer (CRC) whole-slide images. The area under the curves for receiver operating characteristic curves ranged from 0.693 to 0.809 for APC, KRAS, PIK3CA, SMAD4, and TP53, showing the potential for deep learning-based mutation prediction in the CRC pathology images. Furthermore, the prediction performance can be enhanced with the expansion of datasets.
Publish Date 2020-10-28 08:26
Citation Jang HJ, Lee A, Kang J, Song IH, Lee SH. Prediction of clinically actionable genetic alterations from colorectal cancer histopathology images using deep learning. World J Gastroenterol 2020; 26(40): 6207-6223
URL https://www.wjgnet.com/1007-9327/full/v26/i40/6207.htm
DOI https://dx.doi.org/10.3748/wjg.v26.i40.6207
Full Article (PDF) WJG-26-6207.pdf
Full Article (Word) WJG-26-6207.docx
Manuscript File 57895_Auto_Edited.docx
Answering Reviewers 57895-Answering reviewers.pdf
Audio Core Tip 57895-Audio core tip.m4a
Conflict-of-Interest Disclosure Form 57895-Conflict-of-interest statement.pdf
Copyright License Agreement 57895-Copyright license agreement.pdf
Approved Grant Application Form(s) or Funding Agency Copy of any Approval Document(s) 57895-Grant application form(s).pdf
Institutional Review Board Approval Form or Document 57895-Institutional review board statement.pdf
Non-Native Speakers of English Editing Certificate 57895-Language certificate.pdf
Supplementary Material 57895-Supplementary material.pdf
Peer-review Report 57895-Peer-review(s).pdf
Scientific Misconduct Check 57895-Bing-Yan JP-1.png
Scientific Misconduct Check 57895-Scientific misconduct check.pdf
Scientific Editor Work List 57895-Scientific editor work list.pdf